First, nice job on the construction, and implementation of this.
That said, and echoing some of the others, I am a bit leery of putting a 1300 lb load on that. Did you do any calcs or have it reviewed by a structural engineer?
You may want to consider doing some proof load testing by lifting incrementally heavier loads just a few inches off the ground, and the measuring deflection of the beams, joists and connections, and inspecting each connector carefully. You should do this in several points, middle of cross beam, end of cross beam, and then with cross beam centered between joists, and the centered at one joist.
I would hate to see you trying to lift something too heavy and pull the roof down on yourself, or have one of the connectors give way.
I would also agree with akdiesel that at max only 4 or 5 trusses are seeing the load at any one time, which will decrease the allowable load.
Typically crane systems have a safety factor of at least 4, which means the allowable loads on each of those connectors shoul be divided by 4.
I don't know that the harbor freight crane is the weak point....
Let us know the results of your testing and feedback from a structural engineer.
Again, looks nice tho. Some more pics of the garage would be good too, looks like a nice one!