They don't give any real photometric data; but just looking at the photos & description, I'd be a bit leery of those "parabolic" fixtures with only a 9-foot ceiling. In an office environment, where you want to concentrate the light over each cubicle/workstation, they'd probably work pretty well; in a garage/shop where evenness of illumination is at least as important as overall brightness, not so much.
For just token "walk through" lighting, even that seems a bit much. Do you REALLY want to turn on ~400 watts of light (three 4-tube fixtures at 32 watts/tube = 384 watts) just to go grab a screwdriver or somesuch? Even in a (for example) 25'x40' space, two (maybe three, depending in part on the shape of that space) two-tube F32T8s should be MORE than sufficient for that purpose.
What sort of "plastic reflector" are you referring to? If it is the milk-white type commonly found in kitchens, I would indeed expect some significant light loss. By comparison, the clear prismatic types tend to be pretty efficient in terms of total light transmission; but they do diffuse the light significantly, which may lead to an impression of reduced brightness near the source.
FWIW, if bulb protection is the only major issue driving this decision, then slip-on acrylic tubes which fit directly over the T8 tubes will do the trick very nicely:
http://www.homedepot.com/p/Lithonia-Lighting-4-ft-Fluorescent-Tube-Protector-TGT8CL4-R24/100163152
OTOH, if esthetics are also an issue, then all bets are off and the sky is the limit in terms of potential budget. If you don't believe me, get your wife involved.
That said, to my eye those simple two-tube Home Depot fixtures I cited previously look just fine (as long as you keep them clean). I'm currently planning to use something like them in my garage, probably in more-or-less continuous "strips" around the perimeter, plus MAYBE one more two-tube fixture centered over each parking spot (which will become my "walk-through" lighting, activated by the door opener in addition to manual control). I'll then augment this with task lighting at the workbench and a trouble light on an overhead retractable reel near the center of the space. However, my garage is much smaller than yours (approx. 20'x20'), and my ceiling is a bit taller (just under 10 feet).
Were it me, I'd probably break up the "main" lighting into at least two (perhaps as many as four, given the size of the space) banks, arranged to provide zone control and/or brightness control. Then add whatever task lighting you might need in specific locations (such as your workbench). Odds are that, depending on just what you're doing where, you will rarely need to run everything at the same time; but this would provide the flexibility to put plenty of light where you need it at that moment, without wasting a lot of light/power where you don't need it.
Well, that's another matter entirely. Beauty is in the eye of the beholder, and all that.