Some good books on this subject:
Nuts, Bolts, Fastners and Plumbing by Carroll Smith
Can be found in the transportation section of Barnes & Noble or Borders
Mechancial Engineering Design by Shigley and Mischke
Find a used copy only, they make the students buy the latest editions, so
old editions should be cheap. (not too much calculus in this book, so everyone can get something out of it)
Machinery's Handbook.
Again look for an old edition. Machinists usually own this one.
Be carefull when designing for shear loads (perpendicular to the bolt's axis)
For example, a plate with four bolts may be under 1200 psi in shear. you would think that four bolts rated 400 psi in shear could do the job, but due to tolerancing of the bolt holes, only one bolt could be loaded, while the others are in the middle of the holes. So one bolt would have to be strong enough to withstand more than 1200 psi in shear. (Add 20% factor of saftey)